じゃ、BATファイルではどうかな? とか試してみたら?
はい。サンプル
  public void exec()
  {
    String[] cmds = {"run.bat"};
    try
    {
      String  line;
      Runtime  runtime = Runtime.getRuntime();
      Process  p =  runtime.exec(cmds);
      BufferedReader  stdout = new BufferedReader(
        new InputStreamReader(p.getInputStream()));
      BufferedReader  stderr = new BufferedReader(
        new InputStreamReader(p.getErrorStream()));

      while((line = stdout.readLine()) != null) {
        System.out.println(line);
      }
      while((line = stderr.readLine()) != null) {
        System.err.println(line);
      }
    } catch (Exception e) {
      e.printStackTrace();
    }



  }